Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.17■□□□□ 0.34
Atf6F6VAN0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.17■□□□□ 0.34
Atf6F6VAN0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Atf6F6VAN0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Haglr-201ENSMUST00000100000 2085 ntBASIC17.17■□□□□ 0.34
Atf6F6VAN0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.17■□□□□ 0.34
Atf6F6VAN0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Atf6F6VAN0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.16■□□□□ 0.34
Atf6F6VAN0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.16■□□□□ 0.34
Atf6F6VAN0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf6F6VAN0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.15■□□□□ 0.34
Atf6F6VAN0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Atf6F6VAN0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Atf6F6VAN0 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.14■□□□□ 0.34
Atf6F6VAN0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.14■□□□□ 0.33
Atf6F6VAN0 Gm11539-201ENSMUST00000119837 557 ntBASIC17.14■□□□□ 0.33
Atf6F6VAN0 Gm13436-201ENSMUST00000120418 567 ntBASIC17.14■□□□□ 0.33
Atf6F6VAN0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Atf6F6VAN0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Atf6F6VAN0 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms