Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Gm28305F6U473 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm28305F6U473 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Gm28305F6U473 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28305F6U473 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28305F6U473 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm28305F6U473 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Gm28305F6U473 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.38□□□□□ -0.43
Gm28305F6U473 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm28305F6U473 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm28305F6U473 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.38□□□□□ -0.43
Gm28305F6U473 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm28305F6U473 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.37□□□□□ -0.43
Gm28305F6U473 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Gm43566-201ENSMUST00000196851 808 ntBASIC12.37□□□□□ -0.43
Gm28305F6U473 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.37□□□□□ -0.43
Gm28305F6U473 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm28305F6U473 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm28305F6U473 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Gm28305F6U473 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm28305F6U473 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm28305F6U473 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28305F6U473 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Gm28305F6U473 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm28305F6U473 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28305F6U473 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28305F6U473 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm28305F6U473 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm28305F6U473 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28305F6U473 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms