Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4aE9Q735 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4aE9Q735 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4aE9Q735 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4aE9Q735 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.07■□□□□ 0.8
Ube4aE9Q735 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4aE9Q735 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ube4aE9Q735 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ube4aE9Q735 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.05■□□□□ 0.8
Ube4aE9Q735 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.05■□□□□ 0.8
Ube4aE9Q735 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Rps4l-201ENSMUST00000071745 943 ntBASIC20.05■□□□□ 0.8
Ube4aE9Q735 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Ube4aE9Q735 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Ube4aE9Q735 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.04■□□□□ 0.8
Ube4aE9Q735 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.04■□□□□ 0.8
Ube4aE9Q735 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ube4aE9Q735 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4aE9Q735 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Gm18195-201ENSMUST00000207604 706 ntBASIC20.03■□□□□ 0.8
Ube4aE9Q735 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.03■□□□□ 0.8
Ube4aE9Q735 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ube4aE9Q735 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Gm6443-201ENSMUST00000203599 874 ntBASIC20.02■□□□□ 0.8
Ube4aE9Q735 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.02■□□□□ 0.8
Ube4aE9Q735 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ube4aE9Q735 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
Ube4aE9Q735 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ube4aE9Q735 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Ube4aE9Q735 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.01■□□□□ 0.79
Ube4aE9Q735 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ube4aE9Q735 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20■□□□□ 0.79
Ube4aE9Q735 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 Gm1818-201ENSMUST00000169406 1184 ntBASIC20■□□□□ 0.79
Ube4aE9Q735 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ube4aE9Q735 Gm6296-201ENSMUST00000222599 943 ntBASIC20■□□□□ 0.79
Ube4aE9Q735 AC114585.2-202ENSMUST00000228094 426 ntBASIC20■□□□□ 0.79
Ube4aE9Q735 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20■□□□□ 0.79
Ube4aE9Q735 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms