Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm13453-201ENSMUST00000118708 357 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Gm13042-201ENSMUST00000119244 1955 ntBASIC9.38□□□□□ -0.91
Herc1E9PZP8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc1E9PZP8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.37□□□□□ -0.91
Herc1E9PZP8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC9.37□□□□□ -0.91
Herc1E9PZP8 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.37□□□□□ -0.91
Herc1E9PZP8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc1E9PZP8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm25287-201ENSMUST00000103846 110 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm22918-201ENSMUST00000103855 110 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Mir7684-201ENSMUST00000183858 60 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm28631-201ENSMUST00000190740 334 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm43179-201ENSMUST00000198797 275 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Grk6-207ENSMUST00000225925 2769 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm7730-201ENSMUST00000212486 454 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm15427-201ENSMUST00000117288 531 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm11453-201ENSMUST00000117318 1007 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm14719-201ENSMUST00000121891 340 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Gm12497-201ENSMUST00000138778 237 ntBASIC9.36□□□□□ -0.91
Herc1E9PZP8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Herc1E9PZP8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.35□□□□□ -0.91
Herc1E9PZP8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Gm20553-201ENSMUST00000204205 844 ntBASIC9.35□□□□□ -0.91
Herc1E9PZP8 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Herc1E9PZP8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms