Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 Gm27306-201ENSMUST00000183970 107 ntBASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col6a3E9PWQ3 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Gm13829-201ENSMUST00000119600 138 ntBASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Gm27646-201ENSMUST00000183989 110 ntBASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Gm18827-201ENSMUST00000188341 790 ntBASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Col6a3E9PWQ3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col6a3E9PWQ3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Gm13597-201ENSMUST00000121239 375 ntBASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Gm17271-201ENSMUST00000165535 355 ntBASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col6a3E9PWQ3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Gm12497-201ENSMUST00000138778 237 ntBASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Mir3102-201ENSMUST00000175555 104 ntBASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Gm9794-201ENSMUST00000202370 423 ntBASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col6a3E9PWQ3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Col6a3E9PWQ3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms