Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Rprl3-201ENSMUST00000157400 290 ntBASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Gm27321-201ENSMUST00000185021 205 ntBASIC14.78□□□□□ -0.04
Dchs1E9PVD3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.78□□□□□ -0.04
Dchs1E9PVD3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.78□□□□□ -0.04
Dchs1E9PVD3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Dchs1E9PVD3 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Gm7230-201ENSMUST00000173026 815 ntBASIC14.77□□□□□ -0.05
Dchs1E9PVD3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Dchs1E9PVD3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Gm15165-201ENSMUST00000118140 502 ntBASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Gm26308-201ENSMUST00000157768 69 ntBASIC14.76□□□□□ -0.05
Dchs1E9PVD3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Dchs1E9PVD3 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Dchs1E9PVD3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Gm11336-201ENSMUST00000118168 334 ntBASIC14.74□□□□□ -0.05
Dchs1E9PVD3 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Gm14140-201ENSMUST00000119999 995 ntBASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Dchs1E9PVD3 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms