Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Gm3543D3Z235 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3543D3Z235 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.13■□□□□ 0.01
Gm3543D3Z235 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm3543D3Z235 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Gm3543D3Z235 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Gm6659-201ENSMUST00000174752 547 ntBASIC15.12■□□□□ 0.01
Gm3543D3Z235 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.12■□□□□ 0.01
Gm3543D3Z235 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.12■□□□□ 0.01
Gm3543D3Z235 Gm18032-201ENSMUST00000222541 538 ntBASIC15.12■□□□□ 0.01
Gm3543D3Z235 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.12■□□□□ 0.01
Gm3543D3Z235 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm3543D3Z235 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Gm22697-201ENSMUST00000175194 63 ntBASIC15.11■□□□□ 0.01
Gm3543D3Z235 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm3543D3Z235 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm3543D3Z235 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.1■□□□□ 0.01
Gm3543D3Z235 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm3543D3Z235 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.09■□□□□ 0.01
Gm3543D3Z235 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Gm13216-201ENSMUST00000117145 591 ntBASIC15.09■□□□□ 0.01
Gm3543D3Z235 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Gm3543D3Z235 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms