Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Gm44430-201ENSMUST00000203376 995 ntBASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clrn2B2RVW2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.34■□□□□ 0.69
Clrn2B2RVW2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Gm5712-201ENSMUST00000199748 1043 ntBASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Clrn2B2RVW2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clrn2B2RVW2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Clrn2B2RVW2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.33■□□□□ 0.68
Clrn2B2RVW2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clrn2B2RVW2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Clrn2B2RVW2 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clrn2B2RVW2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms