Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scn7aB1AYL1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Scn7aB1AYL1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Gm11780-201ENSMUST00000136880 516 ntBASIC21.54■■□□□ 1.04
Scn7aB1AYL1 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 AC117588.1-201ENSMUST00000228510 999 ntBASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scn7aB1AYL1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Gm5364-201ENSMUST00000216789 889 ntBASIC21.53■■□□□ 1.04
Scn7aB1AYL1 AC154757.1-201ENSMUST00000228289 336 ntBASIC21.53■■□□□ 1.04
Scn7aB1AYL1 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.53■■□□□ 1.04
Scn7aB1AYL1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.53■■□□□ 1.04
Scn7aB1AYL1 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn7aB1AYL1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Gm44832-201ENSMUST00000208849 2303 ntBASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.52■■□□□ 1.04
Scn7aB1AYL1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Scn7aB1AYL1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Gm14140-201ENSMUST00000119999 995 ntBASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Psmb5-202ENSMUST00000227257 622 ntBASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn7aB1AYL1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.51■■□□□ 1.03
Scn7aB1AYL1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scn7aB1AYL1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms