Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Gm45328-201ENSMUST00000210942 917 ntBASIC17.89■□□□□ 0.45
Sh2d4bA6X942 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Sh2d4bA6X942 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Sh2d4bA6X942 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Gm29791-202ENSMUST00000207888 369 ntBASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Sh2d4bA6X942 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Sh2d4bA6X942 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Gm34391-201ENSMUST00000203706 907 ntBASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Birc2-201ENSMUST00000054878 378 ntBASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Sh2d4bA6X942 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms