Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Krt28A6BLY7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Krt28A6BLY7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.53■□□□□ 0.56
Krt28A6BLY7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.53■□□□□ 0.56
Krt28A6BLY7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Krt28A6BLY7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Gm4995-201ENSMUST00000117247 432 ntBASIC18.52■□□□□ 0.56
Krt28A6BLY7 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.52■□□□□ 0.56
Krt28A6BLY7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Gm26308-201ENSMUST00000157768 69 ntBASIC18.52■□□□□ 0.56
Krt28A6BLY7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.52■□□□□ 0.56
Krt28A6BLY7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Gm6550-201ENSMUST00000187574 993 ntBASIC18.52■□□□□ 0.56
Krt28A6BLY7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Krt28A6BLY7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Krt28A6BLY7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Krt28A6BLY7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.5■□□□□ 0.55
Krt28A6BLY7 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.5■□□□□ 0.55
Krt28A6BLY7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.5■□□□□ 0.55
Krt28A6BLY7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Krt28A6BLY7 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Krt28A6BLY7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt28A6BLY7 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt28A6BLY7 Grk6-206ENSMUST00000224995 2971 ntBASIC18.49■□□□□ 0.55
Krt28A6BLY7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Krt28A6BLY7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Krt28A6BLY7 Gm13036-201ENSMUST00000117799 748 ntBASIC18.49■□□□□ 0.55
Krt28A6BLY7 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC18.49■□□□□ 0.55
Krt28A6BLY7 Auts2-212ENSMUST00000178555 309 ntBASIC18.49■□□□□ 0.55
Krt28A6BLY7 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.49■□□□□ 0.55
Krt28A6BLY7 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Krt28A6BLY7 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms