Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.06□□□□□ -0.16
Col6a4A2AX52 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col6a4A2AX52 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.05□□□□□ -0.16
Col6a4A2AX52 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Gm13036-201ENSMUST00000117799 748 ntBASIC14.05□□□□□ -0.16
Col6a4A2AX52 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.05□□□□□ -0.16
Col6a4A2AX52 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.05□□□□□ -0.16
Col6a4A2AX52 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col6a4A2AX52 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Gm13186-201ENSMUST00000118031 316 ntBASIC14.04□□□□□ -0.16
Col6a4A2AX52 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.04□□□□□ -0.16
Col6a4A2AX52 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Auts2-212ENSMUST00000178555 309 ntBASIC14.04□□□□□ -0.16
Col6a4A2AX52 Gm27000-201ENSMUST00000182943 842 ntBASIC14.04□□□□□ -0.16
Col6a4A2AX52 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col6a4A2AX52 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm4995-201ENSMUST00000117247 432 ntBASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm7862-201ENSMUST00000121461 292 ntBASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm8000-201ENSMUST00000188378 592 ntBASIC14.03□□□□□ -0.16
Col6a4A2AX52 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.03□□□□□ -0.16
Col6a4A2AX52 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms