Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn1aA2APX8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn1aA2APX8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn1aA2APX8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scn1aA2APX8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.48■□□□□ 0.39
Scn1aA2APX8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.48■□□□□ 0.39
Scn1aA2APX8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn1aA2APX8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.47■□□□□ 0.39
Scn1aA2APX8 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.47■□□□□ 0.39
Scn1aA2APX8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.47■□□□□ 0.39
Scn1aA2APX8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn1aA2APX8 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.47■□□□□ 0.39
Scn1aA2APX8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.46■□□□□ 0.39
Scn1aA2APX8 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn1aA2APX8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scn1aA2APX8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Scn1aA2APX8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.45■□□□□ 0.38
Scn1aA2APX8 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn1aA2APX8 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.45■□□□□ 0.38
Scn1aA2APX8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.45■□□□□ 0.38
Scn1aA2APX8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.45■□□□□ 0.38
Scn1aA2APX8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.45■□□□□ 0.38
Scn1aA2APX8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Gm27741-201ENSMUST00000185060 237 ntBASIC17.45■□□□□ 0.38
Scn1aA2APX8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.45■□□□□ 0.38
Scn1aA2APX8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn1aA2APX8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.44■□□□□ 0.38
Scn1aA2APX8 Mir3081-201ENSMUST00000175305 84 ntBASIC17.44■□□□□ 0.38
Scn1aA2APX8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms