Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav12-1A0N8R1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Gm37856-201ENSMUST00000191634 999 ntBASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Trmt13-210ENSMUST00000198454 880 ntBASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav12-1A0N8R1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Gm15378-201ENSMUST00000121894 207 ntBASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav12-1A0N8R1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav12-1A0N8R1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12-1A0N8R1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12-1A0N8R1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms