Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 AW822252-206ENSMUST00000208904 237 ntBASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.72■□□□□ 0.27
Gm3854A0A1B0GSS6 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Gm13312-201ENSMUST00000119631 718 ntBASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Gm3854A0A1B0GSS6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Gm3854A0A1B0GSS6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Gm3854A0A1B0GSS6 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm27867-201ENSMUST00000184778 125 ntBASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Gm3854A0A1B0GSS6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Gm3854A0A1B0GSS6 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm3854A0A1B0GSS6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms