Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm27463-201ENSMUST00000183569 57 ntBASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lnp1A0A1B0GSK3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm11539-201ENSMUST00000119837 557 ntBASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm13436-201ENSMUST00000120418 567 ntBASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lnp1A0A1B0GSK3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.91□□□□□ -0.18
Lnp1A0A1B0GSK3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lnp1A0A1B0GSK3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms