Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trbv17A0A140T8P8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv17A0A140T8P8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trbv17A0A140T8P8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv17A0A140T8P8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trbv17A0A140T8P8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trbv17A0A140T8P8 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Gm37055-201ENSMUST00000191866 133 ntBASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Odf3b-204ENSMUST00000227834 930 ntBASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trbv17A0A140T8P8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trbv17A0A140T8P8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms