Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm11927-201ENSMUST00000118472 759 ntBASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm26571-201ENSMUST00000181399 666 ntBASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Igkv1-88A0A140T8N1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Mir2861-201ENSMUST00000175539 82 ntBASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Mtag2-201ENSMUST00000058665 714 ntBASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Haglr-201ENSMUST00000100000 2085 ntBASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Igkv1-88A0A140T8N1 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm5408-201ENSMUST00000197998 747 ntBASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Rab3c-203ENSMUST00000224180 967 ntBASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Igkv1-88A0A140T8N1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Igkv1-88A0A140T8N1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms