Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Gm18958-201ENSMUST00000174258 762 ntBASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Mir3081-201ENSMUST00000175305 84 ntBASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cfap99A0A140LIX9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Gm6623-201ENSMUST00000173570 544 ntBASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cfap99A0A140LIX9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Gm10566-201ENSMUST00000086739 996 ntBASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cfap99A0A140LIX9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cfap99A0A140LIX9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Gm27357-201ENSMUST00000183754 135 ntBASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cfap99A0A140LIX9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms