Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav9d-4A0A0G2JG37 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav9d-4A0A0G2JG37 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav9d-4A0A0G2JG37 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gm7514-201ENSMUST00000209475 934 ntBASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 AC140264.2-202ENSMUST00000218746 817 ntBASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trav9d-4A0A0G2JG37 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms