Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav4-3A0A0B4J1K1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav4-3A0A0B4J1K1 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Rps24-207ENSMUST00000224568 714 ntBASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 AC093043.1-201ENSMUST00000226700 898 ntBASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav4-3A0A0B4J1K1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms