Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trbv16A0A0B4J1H3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm9731-201ENSMUST00000209480 747 ntBASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trbv16A0A0B4J1H3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm27000-201ENSMUST00000182943 842 ntBASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm43183-201ENSMUST00000200632 547 ntBASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.11□□□□□ -0.47
Trbv16A0A0B4J1H3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Dancr-204ENSMUST00000132389 2347 ntBASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.1□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.09□□□□□ -0.47
Trbv16A0A0B4J1H3 Gm20049-201ENSMUST00000219950 730 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms