Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sirpb1aA0A0A6YYP6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.88■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sirpb1aA0A0A6YYP6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms