Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28557A0A087WQQ0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.07■□□□□ 0
Gm28557A0A087WQQ0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.07■□□□□ 0
Gm28557A0A087WQQ0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28557A0A087WQQ0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm28557A0A087WQQ0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm28557A0A087WQQ0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm28557A0A087WQQ0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Gm28557A0A087WQQ0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Gm12933-201ENSMUST00000120203 872 ntBASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Gm8495-201ENSMUST00000188740 694 ntBASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Gm37179-201ENSMUST00000194862 823 ntBASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Gm28557A0A087WQQ0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Gm12382-201ENSMUST00000122005 922 ntBASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Gm27275-201ENSMUST00000184318 272 ntBASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.04■□□□□ -0
Gm28557A0A087WQQ0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.03■□□□□ -0
Gm28557A0A087WQQ0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms