Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Trav6-4A0A075B6B4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Gm45058-201ENSMUST00000205810 766 ntBASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Gm7370-201ENSMUST00000219471 767 ntBASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav6-4A0A075B6B4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-4A0A075B6B4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Gm7213-201ENSMUST00000215977 950 ntBASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Gm9987-201ENSMUST00000069768 567 ntBASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-4A0A075B6B4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-4A0A075B6B4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms