Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC13.33□□□□□ -0.28
Trav17A0A075B655 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Gm2559-201ENSMUST00000201323 363 ntBASIC13.33□□□□□ -0.28
Trav17A0A075B655 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.33□□□□□ -0.28
Trav17A0A075B655 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav17A0A075B655 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.32□□□□□ -0.28
Trav17A0A075B655 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav17A0A075B655 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Gm42569-201ENSMUST00000200539 472 ntBASIC13.31□□□□□ -0.28
Trav17A0A075B655 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav17A0A075B655 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.3□□□□□ -0.28
Trav17A0A075B655 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.3□□□□□ -0.28
Trav17A0A075B655 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.3□□□□□ -0.28
Trav17A0A075B655 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav17A0A075B655 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav17A0A075B655 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Gm26571-201ENSMUST00000181399 666 ntBASIC13.29□□□□□ -0.28
Trav17A0A075B655 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav17A0A075B655 AC122769.4-201ENSMUST00000228166 901 ntBASIC13.29□□□□□ -0.28
Trav17A0A075B655 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav17A0A075B655 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms