Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav8-1A0A075B641 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav8-1A0A075B641 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Gm26833-201ENSMUST00000180899 440 ntBASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Gm40848-201ENSMUST00000221998 324 ntBASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav8-1A0A075B641 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav8-1A0A075B641 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms