Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Gm11927-201ENSMUST00000118472 759 ntBASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4-2A0A075B638 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4-2A0A075B638 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4-2A0A075B638 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Gm7290-201ENSMUST00000104990 617 ntBASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Gm12918-201ENSMUST00000120234 636 ntBASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Gm15710-201ENSMUST00000121821 636 ntBASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Gm5075-201ENSMUST00000196916 622 ntBASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Gm10493-201ENSMUST00000097270 612 ntBASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4-2A0A075B638 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4-2A0A075B638 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms