Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav13d-1A0A075B606 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Il3ra-202ENSMUST00000223589 738 ntBASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Gm7367-201ENSMUST00000057611 492 ntBASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav13d-1A0A075B606 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav13d-1A0A075B606 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Gm17661-201ENSMUST00000170317 270 ntBASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Gm27389-201ENSMUST00000183622 195 ntBASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Gm8969-201ENSMUST00000199694 526 ntBASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav13d-1A0A075B606 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav13d-1A0A075B606 Gm18958-201ENSMUST00000174258 762 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms