Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav9-1A0A075B601 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9-1A0A075B601 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9-1A0A075B601 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9-1A0A075B601 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav9-1A0A075B601 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav9-1A0A075B601 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Gm37025-201ENSMUST00000195159 829 ntBASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav9-1A0A075B601 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Gm17661-201ENSMUST00000170317 270 ntBASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav9-1A0A075B601 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9-1A0A075B601 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms