Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
Rnf180Q3U827 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rnf180Q3U827 Serp2-204ENSMUST00000228055 705 ntBASIC29.43■■■□□ 2.3
Rnf180Q3U827 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Rnf180Q3U827 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Rnf180Q3U827 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
Rnf180Q3U827 Gm45364-201ENSMUST00000210883 159 ntBASIC29.4■■■□□ 2.3
Rnf180Q3U827 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Rnf180Q3U827 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
Rnf180Q3U827 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rnf180Q3U827 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC29.38■■■□□ 2.29
Rnf180Q3U827 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rnf180Q3U827 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rnf180Q3U827 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Rnf180Q3U827 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rnf180Q3U827 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rnf180Q3U827 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rnf180Q3U827 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC29.35■■■□□ 2.29
Rnf180Q3U827 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rnf180Q3U827 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
Rnf180Q3U827 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rnf180Q3U827 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC29.32■■■□□ 2.28
Rnf180Q3U827 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC29.32■■■□□ 2.28
Rnf180Q3U827 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Rnf180Q3U827 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rnf180Q3U827 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC29.3■■■□□ 2.28
Rnf180Q3U827 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC29.3■■■□□ 2.28
Rnf180Q3U827 Gm45102-201ENSMUST00000207427 857 ntBASIC29.3■■■□□ 2.28
Rnf180Q3U827 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
Rnf180Q3U827 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rnf180Q3U827 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
Rnf180Q3U827 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
Rnf180Q3U827 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC29.29■■■□□ 2.28
Rnf180Q3U827 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rnf180Q3U827 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rnf180Q3U827 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.28■■■□□ 2.28
Rnf180Q3U827 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC29.28■■■□□ 2.28
Rnf180Q3U827 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rnf180Q3U827 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Rnf180Q3U827 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rnf180Q3U827 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
Rnf180Q3U827 AC153911.1-201ENSMUST00000220378 758 ntBASIC29.25■■■□□ 2.27
Rnf180Q3U827 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
Rnf180Q3U827 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rnf180Q3U827 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC29.24■■■□□ 2.27
Rnf180Q3U827 Gm30023-201ENSMUST00000197970 889 ntBASIC29.24■■■□□ 2.27
Rnf180Q3U827 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rnf180Q3U827 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rnf180Q3U827 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Rnf180Q3U827 Gm15820-201ENSMUST00000201566 728 ntBASIC29.23■■■□□ 2.27
Rnf180Q3U827 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC29.22■■■□□ 2.27
Rnf180Q3U827 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rnf180Q3U827 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC29.2■■■□□ 2.26
Rnf180Q3U827 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Rnf180Q3U827 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
Rnf180Q3U827 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rnf180Q3U827 Gm14117-201ENSMUST00000122417 843 ntBASIC29.18■■■□□ 2.26
Rnf180Q3U827 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Rnf180Q3U827 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC29.17■■■□□ 2.26
Rnf180Q3U827 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC29.17■■■□□ 2.26
Rnf180Q3U827 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Rnf180Q3U827 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC29.17■■■□□ 2.26
Rnf180Q3U827 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Rnf180Q3U827 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Rnf180Q3U827 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29.15■■■□□ 2.26
Rnf180Q3U827 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rnf180Q3U827 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rnf180Q3U827 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rnf180Q3U827 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rnf180Q3U827 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rnf180Q3U827 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Rnf180Q3U827 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf180Q3U827 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
Rnf180Q3U827 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC29.11■■■□□ 2.25
Rnf180Q3U827 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf180Q3U827 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.11■■■□□ 2.25
Rnf180Q3U827 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf180Q3U827 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rnf180Q3U827 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC29.1■■■□□ 2.25
Rnf180Q3U827 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
Rnf180Q3U827 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Rnf180Q3U827 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC29.08■■■□□ 2.25
Rnf180Q3U827 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC29.08■■■□□ 2.25
Rnf180Q3U827 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rnf180Q3U827 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rnf180Q3U827 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rnf180Q3U827 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Rnf180Q3U827 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Rnf180Q3U827 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Rnf180Q3U827 Gm9910-201ENSMUST00000195385 1550 ntBASIC29.04■■■□□ 2.24
Rnf180Q3U827 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rnf180Q3U827 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.03■■■□□ 2.24
Rnf180Q3U827 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rnf180Q3U827 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rnf180Q3U827 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.02■■■□□ 2.24
Rnf180Q3U827 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC29.02■■■□□ 2.24
Rnf180Q3U827 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Rnf180Q3U827 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.01■■■□□ 2.23
Rnf180Q3U827 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29■■■□□ 2.23
Rnf180Q3U827 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.99■■■□□ 2.23
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms