Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.45□□□□□ -1.54
VCPP55072 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.45□□□□□ -1.54
VCPP55072 OR10D4P-201ENST00000525892 951 ntBASIC5.45□□□□□ -1.54
VCPP55072 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VCPP55072 AC134349.2-201ENST00000535136 910 ntBASIC5.45□□□□□ -1.54
VCPP55072 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.45□□□□□ -1.54
VCPP55072 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.45□□□□□ -1.54
VCPP55072 AL390334.1-201ENST00000556395 450 ntBASIC5.45□□□□□ -1.54
VCPP55072 MIR4691-201ENST00000583764 85 ntBASIC5.45□□□□□ -1.54
VCPP55072 AC005252.1-201ENST00000604518 1063 ntBASIC5.45□□□□□ -1.54
VCPP55072 AL590392.1-201ENST00000604960 446 ntBASIC5.45□□□□□ -1.54
VCPP55072 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
VCPP55072 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.45□□□□□ -1.54
VCPP55072 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 THAP12P5-201ENST00000405864 2275 ntBASIC5.45□□□□□ -1.54
VCPP55072 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 IQCB2P-201ENST00000401788 1633 ntBASIC5.45□□□□□ -1.54
VCPP55072 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VCPP55072 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.44□□□□□ -1.54
VCPP55072 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.44□□□□□ -1.54
VCPP55072 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 Z98755.1-201ENST00000407015 1384 ntBASIC5.44□□□□□ -1.54
VCPP55072 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VCPP55072 AC104623.2-202ENST00000623477 4002 ntBASIC5.44□□□□□ -1.54
VCPP55072 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 Z95331.1-201ENST00000623075 23112 ntBASIC5.44□□□□□ -1.54
VCPP55072 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 RNA5SP332-201ENST00000391063 115 ntBASIC5.44□□□□□ -1.54
VCPP55072 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 AC004690.1-201ENST00000418216 328 ntBASIC5.44□□□□□ -1.54
VCPP55072 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.44□□□□□ -1.54
VCPP55072 EI24P4-201ENST00000423683 1078 ntBASIC5.44□□□□□ -1.54
VCPP55072 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.44□□□□□ -1.54
VCPP55072 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.44□□□□□ -1.54
VCPP55072 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 RHOT1P3-201ENST00000436571 331 ntBASIC5.44□□□□□ -1.54
VCPP55072 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.44□□□□□ -1.54
VCPP55072 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.44□□□□□ -1.54
VCPP55072 RPL5P16-201ENST00000471467 790 ntBASIC5.44□□□□□ -1.54
VCPP55072 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.44□□□□□ -1.54
VCPP55072 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 RPL7AP10-201ENST00000481016 791 ntBASIC5.44□□□□□ -1.54
VCPP55072 RPL7P40-201ENST00000481703 745 ntBASIC5.44□□□□□ -1.54
VCPP55072 NIFKP7-201ENST00000503365 834 ntBASIC5.44□□□□□ -1.54
VCPP55072 RN7SKP21-201ENST00000516503 220 ntBASIC5.44□□□□□ -1.54
VCPP55072 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.44□□□□□ -1.54
VCPP55072 AP001804.2-201ENST00000533932 910 ntBASIC5.44□□□□□ -1.54
VCPP55072 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.44□□□□□ -1.54
VCPP55072 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.44□□□□□ -1.54
VCPP55072 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.44□□□□□ -1.54
VCPP55072 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 UBE2FP2-201ENST00000566646 462 ntBASIC5.44□□□□□ -1.54
VCPP55072 AC027228.2-201ENST00000567141 2154 ntBASIC5.44□□□□□ -1.54
VCPP55072 AL445423.1-201ENST00000609941 536 ntBASIC5.44□□□□□ -1.54
VCPP55072 AC022960.2-201ENST00000616300 666 ntBASIC5.44□□□□□ -1.54
VCPP55072 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 AL158062.1-201ENST00000619632 745 ntBASIC5.44□□□□□ -1.54
VCPP55072 AC092747.4-201ENST00000620519 1861 ntBASIC5.44□□□□□ -1.54
VCPP55072 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 AL450345.1-202ENST00000605741 3881 ntBASIC5.44□□□□□ -1.54
VCPP55072 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.44□□□□□ -1.54
VCPP55072 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.44□□□□□ -1.54
VCPP55072 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VCPP55072 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 RNU6-1320P-201ENST00000390838 107 ntBASIC5.43□□□□□ -1.54
VCPP55072 RNU6-1269P-201ENST00000391139 107 ntBASIC5.43□□□□□ -1.54
VCPP55072 SNORA48.7-201ENST00000391302 135 ntBASIC5.43□□□□□ -1.54
VCPP55072 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
VCPP55072 RN7SKP16-201ENST00000410180 299 ntBASIC5.43□□□□□ -1.54
VCPP55072 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VCPP55072 AC106901.1-201ENST00000425086 698 ntBASIC5.43□□□□□ -1.54
VCPP55072 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.43□□□□□ -1.54
VCPP55072 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.43□□□□□ -1.54
VCPP55072 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.43□□□□□ -1.54
VCPP55072 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.43□□□□□ -1.54
VCPP55072 BX842559.2-201ENST00000451418 605 ntBASIC5.43□□□□□ -1.54
VCPP55072 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.43□□□□□ -1.54
VCPP55072 SEPT14P1-201ENST00000458703 648 ntBASIC5.43□□□□□ -1.54
VCPP55072 RNU6-599P-201ENST00000459383 107 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms