Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MMP3P08254 AC079741.1-201ENST00000321498 212 ntBASIC5.6□□□□□ -1.51
MMP3P08254 SNORA63.3-201ENST00000362682 132 ntBASIC5.6□□□□□ -1.51
MMP3P08254 RNA5SP505-201ENST00000364748 108 ntBASIC5.6□□□□□ -1.51
MMP3P08254 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.6□□□□□ -1.51
MMP3P08254 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 RPS4XP9-201ENST00000405151 780 ntBASIC5.6□□□□□ -1.51
MMP3P08254 RNU2-50P-201ENST00000410494 143 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.6□□□□□ -1.51
MMP3P08254 MTND4P24-201ENST00000424002 397 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 AC021876.1-201ENST00000425959 359 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.6□□□□□ -1.51
MMP3P08254 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.6□□□□□ -1.51
MMP3P08254 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 XKRY2-201ENST00000442362 1093 ntBASIC5.6□□□□□ -1.51
MMP3P08254 RPL36AP15-201ENST00000444514 266 ntBASIC5.6□□□□□ -1.51
MMP3P08254 BX842559.2-201ENST00000451418 605 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC096741.1-201ENST00000472250 846 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC022336.1-201ENST00000475510 337 ntBASIC5.6□□□□□ -1.51
MMP3P08254 RPL5P22-201ENST00000480199 884 ntBASIC5.6□□□□□ -1.51
MMP3P08254 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 RN7SL346P-201ENST00000491561 294 ntBASIC5.6□□□□□ -1.51
MMP3P08254 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.6□□□□□ -1.51
MMP3P08254 AC090058.1-201ENST00000498788 435 ntBASIC5.6□□□□□ -1.51
MMP3P08254 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 AC119751.4-201ENST00000507498 357 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC010468.3-201ENST00000508225 458 ntBASIC5.6□□□□□ -1.51
MMP3P08254 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.6□□□□□ -1.51
MMP3P08254 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.6□□□□□ -1.51
MMP3P08254 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.6□□□□□ -1.51
MMP3P08254 AC113192.3-201ENST00000529152 742 ntBASIC5.6□□□□□ -1.51
MMP3P08254 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 AP006289.1-201ENST00000538089 277 ntBASIC5.6□□□□□ -1.51
MMP3P08254 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MMP3P08254 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MMP3P08254 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.6□□□□□ -1.51
MMP3P08254 AC019322.1-201ENST00000571869 389 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
MMP3P08254 RPAP2P1-201ENST00000603626 1168 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC020910.3-201ENST00000603701 874 ntBASIC5.6□□□□□ -1.51
MMP3P08254 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.6□□□□□ -1.51
MMP3P08254 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
MMP3P08254 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.6□□□□□ -1.51
MMP3P08254 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
MMP3P08254 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
MMP3P08254 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
MMP3P08254 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.59□□□□□ -1.51
MMP3P08254 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.59□□□□□ -1.51
MMP3P08254 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
MMP3P08254 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
MMP3P08254 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
MMP3P08254 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
MMP3P08254 ATP5HP3-201ENST00000396994 486 ntBASIC5.59□□□□□ -1.51
MMP3P08254 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 RN7SKP100-201ENST00000411258 284 ntBASIC5.59□□□□□ -1.51
MMP3P08254 GTF2IP5-201ENST00000414608 731 ntBASIC5.59□□□□□ -1.51
MMP3P08254 REREP1Y-201ENST00000422655 198 ntBASIC5.59□□□□□ -1.51
MMP3P08254 AL121882.1-201ENST00000422893 417 ntBASIC5.59□□□□□ -1.51
MMP3P08254 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.59□□□□□ -1.51
MMP3P08254 MTND2P21-201ENST00000436242 1042 ntBASIC5.59□□□□□ -1.51
MMP3P08254 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.59□□□□□ -1.51
MMP3P08254 REREP2Y-201ENST00000439103 200 ntBASIC5.59□□□□□ -1.51
MMP3P08254 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 FCF1P6-201ENST00000456841 595 ntBASIC5.59□□□□□ -1.51
MMP3P08254 AC104849.1-201ENST00000462623 405 ntBASIC5.59□□□□□ -1.51
MMP3P08254 AC105918.1-201ENST00000474399 838 ntBASIC5.59□□□□□ -1.51
MMP3P08254 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 AC021193.1-201ENST00000511607 420 ntBASIC5.59□□□□□ -1.51
MMP3P08254 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 RNU6-1334P-201ENST00000516032 105 ntBASIC5.59□□□□□ -1.51
MMP3P08254 RAB9BP1-201ENST00000519581 626 ntBASIC5.59□□□□□ -1.51
MMP3P08254 AC012339.2-201ENST00000523996 453 ntBASIC5.59□□□□□ -1.51
MMP3P08254 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.59□□□□□ -1.51
MMP3P08254 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms