Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 RNU6-1257P-201ENST00000384625 110 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 ATP5F1P6-201ENST00000402768 767 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 RPS27AP12-201ENST00000429552 465 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC011242.1-201ENST00000433596 1158 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 Z99127.2-201ENST00000441426 334 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AL359073.1-201ENST00000448036 403 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 SLC25A18P1-201ENST00000449385 454 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC098826.2-201ENST00000452011 651 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 RPL7P32-201ENST00000457119 744 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC011276.1-201ENST00000469688 323 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 RPL7P41-201ENST00000485823 957 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC023424.1-201ENST00000496058 459 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 SCARNA22-201ENST00000503991 125 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC093840.1-201ENST00000511599 336 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 RNU6-319P-201ENST00000516025 108 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 OR5D2P-201ENST00000524390 911 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC011626.1-201ENST00000604710 562 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 RAD17P2-201ENST00000451754 1977 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 AC005225.5-201ENST00000623547 2225 ntBASIC7.56□□□□□ -1.2
RAPGEF3O95398 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC7.56□□□□□ -1.2
RAPGEF3O95398 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RAPGEF3O95398 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 HSPD1P8-201ENST00000400121 1658 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 CDY11P-201ENST00000447168 1651 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AC090220.1-201ENST00000593078 1699 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 OR10AB1P-202ENST00000641219 1686 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 MIR589-201ENST00000385238 99 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL158073.1-201ENST00000426848 1104 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AC124944.2-201ENST00000429866 1242 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 REG1CP-206ENST00000447469 496 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 HMGN1P5-201ENST00000448591 263 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 OFD1P3Y-201ENST00000453312 783 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 RN7SL189P-201ENST00000468631 289 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AC135999.1-201ENST00000478962 479 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 NPM1P17-201ENST00000479221 602 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AC023818.1-201ENST00000498379 384 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 GTF2IP9-201ENST00000502460 301 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 RN7SKP98-201ENST00000517070 156 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL121594.4-201ENST00000556211 1196 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 CLIC4P2-201ENST00000601934 717 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL096803.3-201ENST00000609032 532 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL645927.2-201ENST00000618350 349 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL121890.3-201ENST00000618494 516 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AC068880.4-201ENST00000623082 495 ntBASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RAPGEF3O95398 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
RAPGEF3O95398 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
RAPGEF3O95398 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RAPGEF3O95398 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RAPGEF3O95398 AC009779.8-201ENST00000641684 4384 ntBASIC7.54□□□□□ -1.2
RAPGEF3O95398 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RAPGEF3O95398 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RAPGEF3O95398 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.54□□□□□ -1.2
RAPGEF3O95398 RNU6-1000P-201ENST00000391066 106 ntBASIC7.54□□□□□ -1.2
RAPGEF3O95398 SEPT7P8-201ENST00000413308 775 ntBASIC7.54□□□□□ -1.2
RAPGEF3O95398 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms