Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR4505-201ENST00000582238 73 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.69□□□□□ -1.82
CXCL1P09341 AC008759.1-201ENST00000589783 983 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 RPL7P50-201ENST00000600588 727 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AC010245.2-201ENST00000606908 1167 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 MIR6813-201ENST00000621638 56 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 AL359757.1-201ENST00000623176 255 ntBASIC3.69□□□□□ -1.82
CXCL1P09341 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CXCL1P09341 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CXCL1P09341 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CXCL1P09341 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
CXCL1P09341 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL1P09341 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 AC107027.3-201ENST00000565095 3473 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 OR56B2P-201ENST00000317102 954 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CXCL1P09341 AL391422.1-201ENST00000402155 436 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 SNORA77-201ENST00000408716 125 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 GABARAPL3-201ENST00000412799 354 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 VN1R37P-201ENST00000419096 748 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 EI24P4-201ENST00000423683 1078 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 YWHAEP5-201ENST00000431545 765 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL1P09341 RPL7P45-201ENST00000455851 743 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 AC100832.1-201ENST00000471945 383 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 OR2A3P-201ENST00000493774 953 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 AC006499.6-201ENST00000511169 607 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 RN7SKP183-201ENST00000517169 324 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL1P09341 IGLVIV-53-201ENST00000520107 367 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL1P09341 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.68□□□□□ -1.82
CXCL1P09341 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.68□□□□□ -1.82
CXCL1P09341 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL1P09341 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 MIR4675-201ENST00000577898 77 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL1P09341 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL1P09341 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CXCL1P09341 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL1P09341 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 MIR7109-201ENST00000613748 65 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 AC090527.3-201ENST00000619041 548 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 MIR4727-201ENST00000622232 55 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 AC073593.1-201ENST00000624500 411 ntBASIC3.68□□□□□ -1.82
CXCL1P09341 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.68□□□□□ -1.82
CXCL1P09341 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CXCL1P09341 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CXCL1P09341 CR382285.2-201ENST00000624662 1495 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CXCL1P09341 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL1P09341 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL1P09341 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CXCL1P09341 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL1P09341 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.67□□□□□ -1.82
CXCL1P09341 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CXCL1P09341 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.67□□□□□ -1.82
CXCL1P09341 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL1P09341 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CXCL1P09341 AL353625.1-202ENST00000366273 571 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL1P09341 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.67□□□□□ -1.82
CXCL1P09341 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL1P09341 RAC1P3-201ENST00000416129 580 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 OR51A6P-201ENST00000418680 1004 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL1P09341 MTND2P11-201ENST00000423638 648 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CXCL1P09341 FAM96AP1-201ENST00000430879 482 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC3.67□□□□□ -1.82
CXCL1P09341 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CXCL1P09341 SUMO2P3-201ENST00000438311 288 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 SCAND3P1-201ENST00000439854 1060 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 AC104651.2-201ENST00000447549 528 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 RPS27AP15-201ENST00000447672 466 ntBASIC3.67□□□□□ -1.82
CXCL1P09341 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms