Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ELOCP7-201ENST00000439968 331 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDH1Q08174 VDAC2P4-201ENST00000452925 711 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 RPS16P9-201ENST00000477220 427 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC013828.1-201ENST00000481845 158 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC073648.3-201ENST00000504939 925 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC108078.1-201ENST00000508073 725 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH1Q08174 RNA5SP135-201ENST00000517019 125 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 MTCO2P4-201ENST00000517968 247 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC109635.6-201ENST00000525487 1113 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDH1Q08174 MIR4800-201ENST00000537353 80 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
PCDH1Q08174 POLR2KP1-201ENST00000553226 168 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC091932.1-201ENST00000569381 427 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC138915.2-201ENST00000569776 97 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC012146.2-201ENST00000576545 416 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC6.57□□□□□ -1.36
PCDH1Q08174 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH1Q08174 BNIP3P8-201ENST00000597863 560 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC103710.1-201ENST00000610003 901 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AL445647.2-201ENST00000615170 130 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 HTR1DP1-201ENST00000616500 888 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC073862.4-201ENST00000622982 854 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC120349.2-201ENST00000625002 298 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 AC140479.4-205ENST00000636339 820 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 AC007485.2-201ENST00000623493 1667 ntBASIC6.57□□□□□ -1.36
PCDH1Q08174 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PCDH1Q08174 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH1Q08174 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH1Q08174 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDH1Q08174 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDH1Q08174 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDH1Q08174 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC015689.2-201ENST00000528172 1738 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 AL161901.1-201ENST00000624954 3425 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 OR5BR1P-201ENST00000524992 1330 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 ZNF402P-201ENST00000404435 3100 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PCDH1Q08174 RNA5SP65-201ENST00000363166 119 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 Y_RNA.535-201ENST00000384612 99 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 Y_RNA.573-201ENST00000384763 105 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 LDHAP5-201ENST00000394996 622 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 MIR1303-201ENST00000408625 86 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 RNU2-65P-201ENST00000410162 185 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 RN7SKP137-201ENST00000411074 307 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AL139135.1-201ENST00000412675 209 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AL663061.1-201ENST00000416625 580 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AC062016.2-201ENST00000420950 676 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 TIMM9P3-201ENST00000428659 274 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AL513175.1-201ENST00000431492 780 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 IGLV3-4-201ENST00000432300 244 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDH1Q08174 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDH1Q08174 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 RN7SL456P-201ENST00000469290 295 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 MARK2P8-201ENST00000476069 952 ntBASIC6.56□□□□□ -1.36
PCDH1Q08174 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDH1Q08174 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDH1Q08174 CARSP2-201ENST00000520688 277 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms