Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 RNA5SP505-201ENST00000364748 108 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC6P09630 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HOXC6P09630 RNA5SP113-201ENST00000410486 84 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 AC119751.6-201ENST00000416712 186 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 RPL17P35-201ENST00000432217 549 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 AC138761.5-201ENST00000433967 325 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC6P09630 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC6P09630 RPL5P25-201ENST00000441148 775 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC6P09630 AC018635.1-201ENST00000468292 1030 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC6P09630 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC6P09630 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC6P09630 AC111000.6-201ENST00000514471 709 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 SEPT10P1-201ENST00000517342 1162 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.83□□□□□ -1.48
HOXC6P09630 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.83□□□□□ -1.48
HOXC6P09630 OR4A43P-201ENST00000532938 908 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.83□□□□□ -1.48
HOXC6P09630 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC6P09630 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC6P09630 MIR3667-201ENST00000581025 74 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 AP005432.2-201ENST00000608162 586 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 MIR6133-201ENST00000617057 108 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC6P09630 AL360270.2-201ENST00000562952 5985 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HOXC6P09630 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.83□□□□□ -1.48
HOXC6P09630 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.83□□□□□ -1.48
HOXC6P09630 MAPK10-263ENST00000641052 4307 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
HOXC6P09630 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HOXC6P09630 SNX18P3-202ENST00000565670 1750 ntBASIC5.83□□□□□ -1.48
HOXC6P09630 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 AC003973.3-201ENST00000624863 2822 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.82□□□□□ -1.48
HOXC6P09630 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 SNORA66-201ENST00000384792 133 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 MT-RNR1-201ENST00000389680 954 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC6P09630 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC6P09630 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 RPL12P43-201ENST00000420608 499 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 AL359265.2-201ENST00000434367 631 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 OR7E125P-201ENST00000443450 846 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 RBMY2TP-201ENST00000451162 947 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC6P09630 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.82□□□□□ -1.48
HOXC6P09630 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC6P09630 PRELID3BP5-201ENST00000508612 460 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 AL136520.1-202ENST00000555494 763 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
HOXC6P09630 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HOXC6P09630 MTND4LP25-201ENST00000570218 163 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 AL139022.2-201ENST00000606934 443 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 AP001521.2-201ENST00000608772 546 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC6P09630 AC099654.3-201ENST00000447087 1546 ntBASIC5.82□□□□□ -1.48
HOXC6P09630 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.82□□□□□ -1.48
HOXC6P09630 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HOXC6P09630 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HOXC6P09630 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 AC016745.2-201ENST00000608834 3443 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC6P09630 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HOXC6P09630 AP000547.3-204ENST00000588548 2523 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HOXC6P09630 SNORA62-201ENST00000365493 153 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 RPL10P10-201ENST00000403509 664 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 AL356967.1-201ENST00000406305 431 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC6P09630 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.81□□□□□ -1.48
HOXC6P09630 VDAC1P6-201ENST00000430062 855 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 BX276092.6-201ENST00000430476 250 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 AC016712.1-201ENST00000431088 378 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.81□□□□□ -1.48
HOXC6P09630 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.81□□□□□ -1.48
HOXC6P09630 RPL36AP15-201ENST00000444514 266 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 BX276092.8-201ENST00000455722 250 ntBASIC5.81□□□□□ -1.48
HOXC6P09630 NDUFA12P1-201ENST00000455914 406 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms