Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH13P55290 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.17□□□□□ -1.58
CDH13P55290 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH13P55290 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 AL390119.1-201ENST00000440329 312 ntBASIC5.17□□□□□ -1.58
CDH13P55290 MTCYBP12-201ENST00000440559 1134 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC064862.4-201ENST00000442180 334 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC006326.1-201ENST00000445465 787 ntBASIC5.17□□□□□ -1.58
CDH13P55290 HSPE1P22-201ENST00000456856 327 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 RN7SL814P-201ENST00000487715 300 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC022133.1-201ENST00000490961 571 ntBASIC5.17□□□□□ -1.58
CDH13P55290 PFN1P8-201ENST00000497012 543 ntBASIC5.17□□□□□ -1.58
CDH13P55290 RPS24P16-201ENST00000497294 392 ntBASIC5.17□□□□□ -1.58
CDH13P55290 HAUS1P1-201ENST00000505275 832 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC074087.1-201ENST00000512059 724 ntBASIC5.17□□□□□ -1.58
CDH13P55290 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH13P55290 AC040958.1-201ENST00000561102 201 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC022884.2-201ENST00000578535 580 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 AL162431.4-201ENST00000604674 411 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC011626.1-201ENST00000604710 562 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC135178.6-201ENST00000605314 398 ntBASIC5.17□□□□□ -1.58
CDH13P55290 AC000068.2-201ENST00000608816 460 ntBASIC5.17□□□□□ -1.58
CDH13P55290 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 AL022322.2-201ENST00000624072 20397 ntBASIC5.17□□□□□ -1.58
CDH13P55290 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CDH13P55290 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDH13P55290 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH13P55290 AL512283.1-201ENST00000606756 1384 ntBASIC5.16□□□□□ -1.58
CDH13P55290 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.16□□□□□ -1.58
CDH13P55290 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH13P55290 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH13P55290 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH13P55290 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CDH13P55290 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 OR9K1P-201ENST00000326513 941 ntBASIC5.16□□□□□ -1.58
CDH13P55290 MIR133B-201ENST00000362210 119 ntBASIC5.16□□□□□ -1.58
CDH13P55290 RNA5SP510-201ENST00000364697 99 ntBASIC5.16□□□□□ -1.58
CDH13P55290 RN7SKP153-201ENST00000365026 316 ntBASIC5.16□□□□□ -1.58
CDH13P55290 MIR589-201ENST00000385238 99 ntBASIC5.16□□□□□ -1.58
CDH13P55290 HSPA8P15-201ENST00000401676 786 ntBASIC5.16□□□□□ -1.58
CDH13P55290 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 RPL21P67-201ENST00000402896 478 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH13P55290 AL590762.3-201ENST00000436372 640 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC073109.1-201ENST00000445066 978 ntBASIC5.16□□□□□ -1.58
CDH13P55290 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH13P55290 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 RANP1-206ENST00000455094 651 ntBASIC5.16□□□□□ -1.58
CDH13P55290 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 AC007998.1-201ENST00000474156 672 ntBASIC5.16□□□□□ -1.58
CDH13P55290 RN7SL423P-201ENST00000486202 304 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC090638.1-201ENST00000498296 909 ntBASIC5.16□□□□□ -1.58
CDH13P55290 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH13P55290 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH13P55290 AC112191.2-201ENST00000522428 333 ntBASIC5.16□□□□□ -1.58
CDH13P55290 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH13P55290 AP003049.1-201ENST00000529418 457 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC027026.1-201ENST00000532323 742 ntBASIC5.16□□□□□ -1.58
CDH13P55290 OR8X1P-201ENST00000534542 869 ntBASIC5.16□□□□□ -1.58
CDH13P55290 NOP56P3-201ENST00000549457 385 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC122134.1-201ENST00000565664 1104 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC021483.2-201ENST00000567415 758 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH13P55290 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 AL450270.1-201ENST00000606160 391 ntBASIC5.16□□□□□ -1.58
CDH13P55290 AC097372.4-201ENST00000625025 466 ntBASIC5.16□□□□□ -1.58
CDH13P55290 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH13P55290 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH13P55290 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH13P55290 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH13P55290 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms