Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cldn9Q9Z0S7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cldn9Q9Z0S7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cldn9Q9Z0S7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Gm5417-201ENSMUST00000079706 384 ntBASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cldn9Q9Z0S7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cldn9Q9Z0S7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms