Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.85■□□□□ 0.29
Scn8aQ9WTU3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.84■□□□□ 0.29
Scn8aQ9WTU3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scn8aQ9WTU3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn8aQ9WTU3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Scn8aQ9WTU3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn8aQ9WTU3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn8aQ9WTU3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn8aQ9WTU3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scn8aQ9WTU3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.83■□□□□ 0.28
Scn8aQ9WTU3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Scn8aQ9WTU3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scn8aQ9WTU3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn8aQ9WTU3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn8aQ9WTU3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms