Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rfwd2Q9R1A8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Rfwd2Q9R1A8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rfwd2Q9R1A8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd2Q9R1A8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd2Q9R1A8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rfwd2Q9R1A8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.27■□□□□ 0.35
Rfwd2Q9R1A8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rfwd2Q9R1A8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Trmt13-210ENSMUST00000198454 880 ntBASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rfwd2Q9R1A8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rfwd2Q9R1A8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms