Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cdh17Q9R100 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cdh17Q9R100 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.34■□□□□ 0.21
Cdh17Q9R100 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.34■□□□□ 0.21
Cdh17Q9R100 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.34■□□□□ 0.21
Cdh17Q9R100 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.34■□□□□ 0.21
Cdh17Q9R100 Timm23-208ENSMUST00000226683 750 ntBASIC16.34■□□□□ 0.21
Cdh17Q9R100 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Cdh17Q9R100 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cdh17Q9R100 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Cdh17Q9R100 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh17Q9R100 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh17Q9R100 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cdh17Q9R100 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cdh17Q9R100 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.33■□□□□ 0.2
Cdh17Q9R100 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cdh17Q9R100 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Gm13168-201ENSMUST00000121771 632 ntBASIC16.32■□□□□ 0.2
Cdh17Q9R100 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.32■□□□□ 0.2
Cdh17Q9R100 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.32■□□□□ 0.2
Cdh17Q9R100 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cdh17Q9R100 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.31■□□□□ 0.2
Cdh17Q9R100 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.31■□□□□ 0.2
Cdh17Q9R100 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cdh17Q9R100 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cdh17Q9R100 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms