Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Clcn2Q9R0A1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Gm4974-201ENSMUST00000209974 875 ntBASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Clcn2Q9R0A1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Gm3375-201ENSMUST00000203929 796 ntBASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Clcn2Q9R0A1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Timm23-208ENSMUST00000226683 750 ntBASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Clcn2Q9R0A1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Clcn2Q9R0A1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms