Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Shroom3Q9QXN0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.77■□□□□ 0.28
Shroom3Q9QXN0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Gm29518-201ENSMUST00000190858 372 ntBASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Shroom3Q9QXN0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Gm13474-201ENSMUST00000122466 815 ntBASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Shroom3Q9QXN0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Shroom3Q9QXN0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.74■□□□□ 0.27
Shroom3Q9QXN0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms