Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Gm4974-201ENSMUST00000209974 875 ntBASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.12■□□□□ 0.33
Msh5Q9QUM7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Msh5Q9QUM7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Msh5Q9QUM7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.1■□□□□ 0.33
Msh5Q9QUM7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh5Q9QUM7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.09■□□□□ 0.33
Msh5Q9QUM7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Msh5Q9QUM7 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh5Q9QUM7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh5Q9QUM7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh5Q9QUM7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh5Q9QUM7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.08■□□□□ 0.33
Msh5Q9QUM7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh5Q9QUM7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Msh5Q9QUM7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 CT010486.3-201ENSMUST00000224555 811 ntBASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh5Q9QUM7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms