Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sec61a2Q9JLR1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Gm15565-201ENSMUST00000118890 427 ntBASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Sec61a2Q9JLR1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Sec61a2Q9JLR1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a2Q9JLR1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a2Q9JLR1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a2Q9JLR1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Sec61a2Q9JLR1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.08■□□□□ 0
Sec61a2Q9JLR1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Mir7071-201ENSMUST00000184847 69 ntBASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Gm21814-202ENSMUST00000203277 873 ntBASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Gm3375-201ENSMUST00000203929 796 ntBASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Timm23-208ENSMUST00000226683 750 ntBASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sec61a2Q9JLR1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms