Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb1Q9JIF7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Copb1Q9JIF7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Copb1Q9JIF7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.36■□□□□ 0.53
Copb1Q9JIF7 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Copb1Q9JIF7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Gm38027-201ENSMUST00000192315 235 ntBASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Dancr-204ENSMUST00000132389 2347 ntBASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Copb1Q9JIF7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
Copb1Q9JIF7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Copb1Q9JIF7 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Copb1Q9JIF7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Copb1Q9JIF7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Copb1Q9JIF7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Copb1Q9JIF7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.32■□□□□ 0.52
Copb1Q9JIF7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Copb1Q9JIF7 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms