Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Gm6420-201ENSMUST00000193885 723 ntBASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ush1cQ9ES64 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.25■□□□□ 0.67
Ush1cQ9ES64 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.24■□□□□ 0.67
Ush1cQ9ES64 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ush1cQ9ES64 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.23■□□□□ 0.67
Ush1cQ9ES64 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.23■□□□□ 0.67
Ush1cQ9ES64 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ush1cQ9ES64 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ush1cQ9ES64 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1cQ9ES64 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Ush1cQ9ES64 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.21■□□□□ 0.67
Ush1cQ9ES64 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.21■□□□□ 0.67
Ush1cQ9ES64 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1cQ9ES64 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1cQ9ES64 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ush1cQ9ES64 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ush1cQ9ES64 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms