Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Gm10231-201ENSMUST00000181584 441 ntBASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Gm10175-202ENSMUST00000208752 441 ntBASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Tubb3Q9ERD7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tubb3Q9ERD7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Gm7889-201ENSMUST00000185591 958 ntBASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Gm4974-201ENSMUST00000209974 875 ntBASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tubb3Q9ERD7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Tubb3Q9ERD7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Gm27463-201ENSMUST00000183569 57 ntBASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 AC159205.6-201ENSMUST00000224935 887 ntBASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Tubb3Q9ERD7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tubb3Q9ERD7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms