Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Gm9727-201ENSMUST00000161387 555 ntBASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Nkx2-4Q9EQM3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Gm26308-201ENSMUST00000157768 69 ntBASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Nkx2-4Q9EQM3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 AV026068-213ENSMUST00000223675 1171 ntBASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-4Q9EQM3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Gm6550-201ENSMUST00000187574 993 ntBASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-4Q9EQM3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.16■□□□□ 0.34
Nkx2-4Q9EQM3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms